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Flagship Pioneering

Senior/Principal Scientist, DMPK

Flagship Pioneering, Cambridge, Massachusetts, us, 02140

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What if…

you could join an organization that creates, resources, and builds life sciences companies that invent breakthrough technologies in order to transform health care and sustainability?

Expedition Medicines is a privately held, early-stage biotechnology company pioneering the emerging field of Protein Editing. At Expedition Medicines we create small molecules that edit protein structure and function to unlock presently undruggable targets and a broad array of therapeutic modalities. Our platform integrates novel small molecule chemistry and chemoproteomic discovery technologies with Machine Learning (ML) to enable generative design. Expedition Medicines is backed by Flagship Pioneering, bringing their courage, vision, and resources to guide Expedition Medicines from platform validation to patient impact. We are seeking collaborative, relentless problem solvers that share our passion for impact to join us!

About the Role We are seeking an innovative and collaborative

Senior / Principal Scientist in Drug Metabolism and Pharmacokinetics (DMPK)

to help shape the next generation of covalent small-molecule therapeutics for previously undruggable targets. The successful candidate will have a proven track record of guiding small molecule drug discovery programs, including experience with both mono- and bi-functional modalities. You will be a key architect in translating molecular design into human pharmacology — applying

deep ADME/PK science

and

modeling

insights to accelerate discovery, inform development candidate selection and support IND-enabling studies.

We’re

assembling the founding DMPK team

— an extraordinary opportunity to operate at the intersection of

chemoproteomics ,

quantum chemistry , and

generative AI . You’ll work with the world’s most advanced

chemoproteomics platform focused on undruggable targets

and a deeply integrated

AI-driven quantum chemistry engine

to redefine what’s possible in modern drug discovery.

This role sits at the interface of

chemistry, biology, formulation, pharmacology, toxicology and machine learning , working closely with program teams to drive decisions from first-in-class concept to IND.

Key Responsibilities

Design and guide

in-vitro and in-vivo ADME/PK studies to characterize absorption, distribution, metabolism, and excretion for small molecules (mono- and bi-functional modalities).

Apply and advance modeling and simulation tools

(PBPK, compartmental, and empirical) to interpret complex datasets and guide clinical pharmacology design.

Integrate DMPK thinking early

in discovery—connecting mechanistic data to compound design, structure–activity relationships, and developability.

Shape translational PK-PD strategy , including in-vitro–in-vivo extrapolation, human dose projection, and species selection for efficacy and safety studies.

Collaborate cross-functionally

with medicinal chemistry, biology, pharmacology, toxicology and machine learning to inform compound prioritization and drive program progression.

Author and critically review

DMPK and modeling components of IND-enabling packages, investigator brochures, and regulatory filings.

Leverage and manage CRO partners , ensuring scientific excellence, data integrity, and rapid execution of external studies.

Communicate insights

with clarity and conviction—translating data into actionable hypotheses for multidisciplinary teams and senior leadership.

Collaboratively implement a strong customer focus

with the ability to have robust discussions with project leaders and other stakeholders to ensure that project, scientific and resource demands are aligned.

Qualifications

Ph.D. in Pharmacokinetics, Drug Metabolism, Pharmaceutical Sciences, or related discipline (or M.S. with ≥10 years of directly relevant biotech/pharma experience)

8–12+ years of experience in DMPK or ADME, ideally spanning discovery through IND enablement.

Demonstrated impact on

compound design and optimization

through integration of DMPK science ( mono- and bi-functional modalities ).

Hands‑on experience with

in‑vitro ADME assays, in‑vivo PK studies , in‑vitro–in‑vivo correlation building and generating human dose projections.

Strong understanding of

enzyme kinetics, transporters, and biotransformation mechanisms .

Proficiency in

PK-PD modeling, PBPK, and simulation approaches

to support preclinical and clinical translation.

Familiarity with

regulatory expectations

for ADME/PK characterization and drug–drug interaction assessment.

Experience managing

external collaborations and CRO partnerships .

You’ll Thrive Here If You

Think from

first principles

Value

cross-disciplinary exploration , from chemistry to computation to translational biology.

Approach others

collaboratively .

Are excited helping to

build frameworks and platforms , not just running assays.

Communicate complex data clearly, connecting mechanistic insight to program strategy.

Enjoy

fast-moving, hypothesis-driven environments .

Are excited

by the idea helping to build a first-in-class company that is redefining the future of drug discovery.

LOCATION:

Cambridge, MA

ABOUT FLAGSHIP PIONEERING Flagship Pioneering invents and builds platform companies, each with the potential for multiple products that transform human health, sustainability and beyond. Since its launch in 2000, Flagship has originated more than 100 companies. Many of these companies have addressed humanity’s most urgent challenges: vaccinating billions of people against COVID-19, curing intractable diseases, improving human health, preempting illness, and feeding the world by improving the resiliency and sustainability of agriculture.

Flagship has been recognized twice on FORTUNE’s “Change the World” list, an annual ranking of companies that have made a positive social and environmental impact through activities that are part of their core business strategies and has been twice named to Fast Company’s annual list of the World’s Most Innovative Companies. Learn more about Flagship at www.flagshippioneering.com.

At Flagship, we accept impossible missions to enable bigger leaps. Our core values guide us through uncertainty and toward lasting impact.

We are an equal opportunity employer . All qualified applicants will be considered for employment without regard to race, color, religion, sex, sexual orientation, gender identity, national origin, disability, protected veteran status, or any other characteristic protected by law.

We recognize that great candidates often bring unique strengths

without fulfilling every qualification . If you have some of the experience listed above but not all, please apply anyway. We are dedicated to building diverse and inclusive teams and look forward to learning more about your background

and interest in Flagship .

Recruitment & Staffing Agencies Flagship Pioneering and its affiliated Flagship Lab companies (collectively, “FSP”) do not accept unsolicited resumes from any source other than candidates. The submission of unsolicited resumes by recruitment or staffing agencies to FSP or its employees is strictly prohibited unless contacted directly by Flagship Pioneering’s internal Talent Acquisition team. Any resume submitted by an agency in the absence of a signed agreement will automatically become the property of FSP, and FSP will not owe any referral or other fees with respect thereto.

The salary range for this role is $126,000 - $214,500. Compensation for the role will depend on a number of factors, including a candidate’s qualifications, skills, competencies, and experience. Expedition Medicines currently offers healthcare coverage, annual incentive program, retirement benefits and a broad range of other benefits. Compensation and benefits information is based on Expedition Medicines's good faith estimate as of the date of publication and may be modified in the future.

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